Bioinformatics Laboratory Publications
Publications
2012 Publications
Pang C, Jiang G, Wang S, Hu B, Liu Q, Deng Y, Huang X. Gene order computation using Alzheimer’s DNA microarray gene expression data and the Ant Colony Optimisation algorithm. Int J Data Min Bioinform. 2012;6(6):617-632. doi: 10.1504/IJDMB.2012.051799. PMID: 23200489.
Schaffer JD, Park JW, Qiao X, Deng Y, Li Y, Land WH. Ensemble Classifier for Lung Cancer Prognosis Using Only Demographic and TNM features. Procedia Comput Sci. 2012;12:450-455. doi: 10.1016/j.procs.2012.09.112.
Ford W, Park JW, Schaffer JW, Deng Y, Li Y, Land WH. Classifying lung cancer recurrence time using novel ensemble method with gene network based input models. Procedia Comput Sci. 2012;12:444-449. doi: 10.1016/j.procs.2012.09.111.
Zhou X, Mao J, Ai J, Deng Y, Roth MR, Pound C, Henegar J, Welti R, Bigler SA. Identification of plasma lipid biomarkers for prostate cancer by lipidomics and bioinformatics. PLoS One. 2012;7(11). doi: 10.1371/journal.pone.0048889. PMID: 23152805; PMCID: PMC3496718.
Davis M, Conlon K, Bohac GC, Barcenas J, Leslie W, Watkins L, Lamzabi I, Deng Y, Li Y, Plate JM. Effect of pemetrexed on innate immune killer cells and adaptive immune T cells in subjects with adenocarcinoma of the pancreas. J Immunother. 2012 Oct;35(8):629-640. doi: 10.1097/CJI.0b013e31826a7e3d. PMID: 23090053.
Song J, Shi L, Li D, Sun Y, Niu Y, Chen Z, Luo H, Pang X, Sun Z, Liu C, Lv A, Deng Y, Larson-Rabin Z, Wilkinson M, Chen S. Extensive pyrosequencing reveals frequent intra-genomic variations of internal transcribed spacer regions of nuclear ribosomal DNA. PLoS One. 2012;7(8). doi: 10.1371/journal.pone.0043971. PMID: 22952790; PMCID: PMC3429491.